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Retain proteins present in a specified group of a SummarizedExperiment object

filter_overlap.Rd

Filters the object to retain only proteins that are present (non-NA) in at least one sample within each unique group of the specified condition.

Usage

filter_overlap(object, condition_name)

# S4 method for class 'SummarizedExperiment,character'
filter_overlap(object, condition_name)

Arguments

object

A SummarizedExperiment object

condition_name

A character string specifying the column name in the colData slot to group samples by.

Value

A new, modified SummarizedExperiment object containing only the overlapping proteins.