Filter Proteins by Percentage of Valid Values

A generic function to filter proteins (rows) from a proteomics data object based on the percentage of samples where they have valid observations.

Usage

filter_proteins_by_percent(object, percent)

# S4 method for class 'SummarizedExperiment,numeric'
filter_proteins_by_percent(object, percent)

Arguments

object

A SummarizedExperiment object.

percent

The minimum percentage (from 0 to 100) of samples in which a protein must have a valid (non-NA) value to be retained.

Value

A modified object of the same class with proteins filtered.