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Plot Coefficient of Variation (CV) Distributions

plot_CVs.Rd

Generates a violin or jitter plot to visualize the distribution of protein CVs for each experimental condition. This plot is useful for comparing the reproducibility and technical variance across different sample groups.

Usage

plot_CVs(object, condition, plot_type = "violin")

# S4 method for class 'SummarizedExperiment'
plot_CVs(object, condition, plot_type = "violin")

Arguments

object

A SummarizedExperiment object.

condition

A character string specifying the column name in the colData slot which defines the replicate groups.

plot_type

The type of plot to generate. Must be either "violin" (the default, which also includes a narrow boxplot) or "jitter".

Value

A ggplot object.